Oss projects by domain: Difference between revisions

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We'd like to improve our outreach to non-CS majors in the sciences by finding open source projects in their disciplines. We plan to use this information both in our publicity and when we're looking for projects to help students contribute to. To that extent, we're asking both for short testimonials (for publicity) as well as insight on how accessible these projects are to newcomers.
This page contains information on open source projects in different scientific/technology disciplines.



__toc__
__toc__
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= Instructions =
= Instructions =


Please add information and testimonials wherever you see fit. If a discipline is missing, please add it.
Please add information and testimonials wherever you see fit. If a discipline is missing, please add it. You can add the same project to multiple disciplines.


Please format disciplines in the following way:
Please format disciplines in the following way:


* '''Name of Discipline'''
* '''Name of Discipline'''
** Recommended
** Projects
*** OSS that is commonly used within the discipline, that an undergraduate reasonably might know about.
*** OSS project that is used within this discipline. Make sure to leave a URL to the project website and if possible a brief description of the software.
**** Comments & Testimonials:
*** There can be multiple projects!
***** This project is poorly documented.
*** Make sure to include a URL to project website, and if possible a brief description of the software.
***** This project has a really active, friendly maintainer.
** Other
***** "This is a testimonial about the project. It's great, I use it all the time in my research! I am totally okay with OpenHatch using my testimonial in outreach emails and similar materials." (Optional attribution - name, position, url of person leaving the testimonial.)
*** This are projects that are less well known or highly specific, but still active and interesting.
*** Another project
*** There can be multiple projects!
** Testimonials
**** Comments & Testimonials:
***** Comment
*** A testimonial should be a brief statement of how using/contributing to an OSS project in your discipline improved your work/career!
***** Testimonial
*** Feel free to include your name & bibliographical info/url, if you want, or leave it anonymous
*** A project previously mentioned in another discipline: please see 'name of other discipline'
** Resources
** Resources
*** Links to places to find more info.
*** Links to places to find more info about projects in this discipline.


= Domains/Departments =
General resources for finding additional projects:
* [http://en.wikipedia.org/wiki/Category:Free_science_software Wikipedia's list of free science software].
* [http://www.anl.gov/technology/software/open-source-software Argonne OSS projects]


* '''Aeronautics and astronautics'''
** Projects
*** [http://www.sunpy.org/ SunPy], a solar physics library actively maintained by NASA GSFC.
**** Comments & Testimonials:
*** [http://makerplane.org/ MakerPlane], a project for building personal planes ([http://opensource.com/life/13/1/open-source-aviation-makerplane article])
**** Comments & Testimonials:
** Resources:
*** Portland State (open source) Aerospace Society: http://psas.pdx.edu/
*** NASA Open Source list at [http://code.nasa.gov/project/ code.nasa.gov]


* '''Atmospheric sciences'''

* Projects
= Common Departments =
*** [http://cmascenter.org/cmaq/ CMAQ] - EPA's development project: a suite of programs for conducting air quality model simulations
**** Comments & Testimonials:
*** [http://www.unidata.ucar.edu/software/gempak/ GEMPAK] - soon to be replaced with [http://www.unidata.ucar.edu/software/awips2/ AWIPS II] - a weather forecasting, display and analysis package, lead developer: National Weather Service
**** Comments & Testimonials:
*** [http://www.openmadrigal.org/ OpenMadrigal] - a database for accessing/archiving geospace data (does geospace == atmospheric science?)
**** Comments & Testimonials:
** Resources
*** [http://www.haystack.mit.edu/atm/open/index.html MIT's Haystack] has some open projects
*** [http://www.openradar.org/cgi-bin/openradar.cgi/Projects OpenRadar] has radio-related oss projects
*** [http://www.ucar.edu/tools/applications_desc.jsp UCAR list]


* '''Astronomy'''
* '''Astronomy'''
** Recommended
** Projects
*** [http://jmars.asu.edu/ Java Mission-planning and Analysis for Remote Sensing (JMARS)]
*** [http://jmars.asu.edu/ Java Mission-planning and Analysis for Remote Sensing (JMARS)]
**** Comments & Testimonials:
** Other
** Testimonials
** Resources:
** Resources:
*** [http://en.wikipedia.org/wiki/Category:Free_astronomy_software Wikipedia Article]
*** [http://en.wikipedia.org/wiki/Category:Free_astronomy_software Wikipedia Article]


* '''Biology'''
* '''Biochemistry'''
** Recommended
** Projects
*** [http://biopython.org/wiki/Main_Page BioPython] - a set of tools for biological computation written in Python
*** [http://biopython.org/wiki/Main_Page BioPython] - a set of tools for biological computation written in Python
**** Comments & Testimonials:
*** [http://www.bioperl.org/wiki/Main_Page BioPerl]
*** [http://www.bioperl.org/wiki/Main_Page BioPerl]
**** Comments & Testimonials:
*** [http://openbabel.org/wiki/Main_Page OpenBabel] - allows anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas
**** Comments & Testimonials:
*** [http://rsbweb.nih.gov/ij/ ImageJ]
*** [http://rsbweb.nih.gov/ij/ ImageJ]
**** Comments & Testimonials:
** Other
*** [http://www.r-project.org/ R] - a programming language for statistical analysis
*** [http://www.r-project.org/ R] - a programming language for statistical analysis
** Testimonials
**** Comments & Testimonials:
** Resources
** Resources


* '''Biochemistry'''
* '''Biology'''
** Recommended
** Projects
*** BioPython (see Biochemistry)
*** [http://biopython.org/wiki/Main_Page BioPython] - a set of tools for biological computation written in Python
*** BioPerl (see Biochemistry)
*** [http://www.bioperl.org/wiki/Main_Page BioPerl]
*** ImageJ (see Biochemistry)
*** [http://openbabel.org/wiki/Main_Page OpenBabel] - allows anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas
*** R (see Biochemistry)
*** [http://rsbweb.nih.gov/ij/ ImageJ]
** Other
** Resources

*** [http://www.r-project.org/ R] - a programming language for statistical analysis
* '''Biomedical Engineering'''
** Testimonials
** Projects
*** [http://biosig.sourceforge.net/ BioSig] - an open source software library for biomedical signal processing of biosignals such as EEG, ECoG, ECG, EOG and EMG
**** Comments & Testimonials:
*** [http://opensim.stanford.edu/work/index.html OpenSim] - tool for modeling and simulation of movement
**** Comments & Testimonials:
** Resources
** Resources


* '''Chemistry'''
* '''Chemistry'''
** Recommended
** Projects
*** OpenBabel (see Biochemistry)
*** [http://openbabel.org/wiki/Main_Page OpenBabel] - allows anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas
** Other
** Testimonials
** Resources:
** Resources:
*** [http://en.wikipedia.org/wiki/Category:Free_chemistry_software Wikipedia article]
*** [http://en.wikipedia.org/wiki/Category:Free_chemistry_software Wikipedia article]


* '''Economics'''
* '''Economics'''
** Recommended
** Projects
*** R (see Biochemistry)
*** [http://www.r-project.org/ R] - a programming language for statistical analysis
** Other
** Testimonials
** Resources:
** Resources:


* '''Geosciences'''
* '''Geosciences'''
** Recommended
** Projects
*** [https://code.google.com/p/geoforge/ GeoForge]
*** [https://code.google.com/p/geoforge/ GeoForge]
**** Comments & Testimonials:
** Other
** Testimonials
** Resources:
** Resources:
*** [http://en.wikipedia.org/wiki/List_of_free_geology_software Wikipedia article]
*** [http://en.wikipedia.org/wiki/List_of_free_geology_software Wikipedia article]

* '''Linguistics'''
** Projects
*** [http://nltk.org/ Python Natural Language Toolkit]
**** Comments & Testimonials:
*** [https://github.com/joshua-decoder/joshua Joshua Machine Translation Toolkit]
**** Comments & Testimonials:
*** [http://www.kura.ats.lmu.de/index.php Kura], a multi-user open source linguistic database
**** Comments & Testimonials:
*** [http://www.apertium.org/ Apertium] open source machine translation
**** Comments & Testimonials:
*** [http://www.fon.hum.uva.nl/praat/ Praat] open source tool used to annotate speech / phonetics
**** Comments & Testimonials:
*** [http://textblob.readthedocs.org/en/dev/ TextBlob] Natural Language Processing tool
**** Comments & Testimonials:
*** [http://clic.cimec.unitn.it/composes/toolkit/ DISSECT] Distributional Semantics toolkit
**** Comments & Testimonials:


** Resources:
*** [http://linguistlist.org/ LINGUIST] email discussion list and software index
*** [http://www-nlp.stanford.edu/links/statnlp.html List of open source statistical NLP tools]
*** [http://sourceforge.net/directory/science-engineering/linguistics/os:linux/freshness:recently-updated/ Sourceforge.net list of language-related software]

* '''Materials science'''
** Projects
*** [http://espressomd.org/wordpress/about/summary/ ESPRESSO] - a software package for performing and analyzing simulations of “coarse-grained” models as used in soft-matter research
**** Comments & Testimonials:
** Resources
*** [http://www.tms.org/pubs/journals/jom/0805/powell-0805.html 2008 discussion of open source in materials science]


* '''Mathematics'''
* '''Mathematics'''
** Recommended
** Projects
*** [http://www.sagemath.org/ Sage Math] - a popular software system combining many projects into a common Python-based interface
*** [http://www.sagemath.org/ Sage Math] - a popular software system combining many projects into a common Python-based interface
**** Comments & Testimonials:
*** [http://www.gap-system.org/ GAP] - a system for computational discrete algebra
*** [http://www.gap-system.org/ GAP] - a system for computational discrete algebra
**** Comments & Testimonials:
*** [http://cocoa.dima.unige.it/ CoCoA] - a system for computations in commutative algebra
*** [http://cocoa.dima.unige.it/ CoCoA] - a system for computations in commutative algebra
**** Comments & Testimonials:
** Other
** Testimonials
** Resources
** Resources
*** [http://en.wikipedia.org/wiki/Category:Free_mathematics_software Wikipedia article]
*** [http://en.wikipedia.org/wiki/Category:Free_mathematics_software Wikipedia article]
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* '''Neuroscience'''
* '''Neuroscience'''
** Recommended
** Projects
*** [http://neuro.debian.net/ NeuroDebian] - a turnkey Linux distribution with major open source neuroimaging packages included
*** [http://www.r-project.org/ R] - a programming language for statistical analysis
**** Comments & Testimonials:
*** [http://neuro.debian.net/ NeuroDebian]
*** [http://neurosynth.org/ Neurosynth] - an online platform to perform meta-analyses on neuroimaging studies
** Other
**** Comments & Testimonials:
*** [http://afni.nimh.nih.gov/afni/ AFNI] - software for performing neuroimaging analyses maintained by the NIH
**** Comments & Testimonials:
*** [http://www.fil.ion.ucl.ac.uk/spm/software/ SPM] - software for doing statistical parametric mapping analysis
**** Comments & Testimonials:
*** [http://stnava.github.io/ANTs/ ANTs] - software to put individual fMRI scans in a common space that can be compared across subjects
**** Comments & Testimonials:
*** [http://nipy.sourceforge.net/nipype/ Nipype] - a common Python interface to a variety of neuroimaging packages
**** Comments & Testimonials:
*** [http://nipy.sourceforge.net/nibabel/ Nibabel] - a Python package to load in neuroimaging data files
**** Comments & Testimonials:
*** [http://fcp-indi.github.io/ C-PAC] - a Python package to configure resting state fMRI analyses
**** Comments & Testimonials:
*** [http://www.gnu.org/software/octave/ Octave] - an open source version of Matlab; many Matlabpbased neuroimaging packages could work with Octave with some extra development
**** Comments & Testimonials:
*** [https://github.com/BackyardBrains/Backyard-Brains-Android-App#readme Backyard Brains]
*** [https://github.com/BackyardBrains/Backyard-Brains-Android-App#readme Backyard Brains]
** Testimonials
**** Comments & Testimonials:
*** [http://www.psychopy.org/ PsychoPy] - a set of tools for doing stimulus presentation and capturing behavioral data
**** Comments & Testimonials:
***** Very friendly, active maintainers but difficult setup process, especially for Windows.
*** [https://pythonhosted.org/pyxnat/ PyXNAT] - allows Python to interface with a popular neuroimaging data management tool
**** Comments & Testimonials:
*** [https://github.com/openworm/PyOpenWorm PyOpenWorm] - Python interface to fetch C. elegans data.
**** Comments & Testimonials:
*** R (see Biochemistry)
*** BioSig (see Biomedical Engineering)
** Resources:
** Resources:
*** [http://opensourcecognitivescience.wordpress.com/2009/07/29/tools-for-psychology-and-neuroscience/ List of tools]
*** [http://opensourcecognitivescience.wordpress.com/2009/07/29/tools-for-psychology-and-neuroscience/ List of tools]
*** [http://bookmarks.makesad.us/insipid.cgi?tag=neuroscience+open-source another list of tools]
*** [http://bookmarks.makesad.us/insipid.cgi?tag=neuroscience+open-source another list of tools]

* '''Nuclear Engineering'''
** Projects
*** [http://lammps.sandia.gov/ LAMMPS] - a molecular dynamics library that can be used to model parallel atomic/subatomic processes at large scale, lead by Sandia National Laboratories
**** Comments & Testimonials:
*** [http://code.google.com/p/open-geiger-development-kit/ OpenGeiger] - an open source, open hardware Geiger Counter
**** Comments & Testimonials:
** Resources
*** [http://fukushimaforum.wordpress.com/workshops/sts-forum-on-the-2011-fukushima-east-japan-disaster/manuscripts/session-3-radiation-information-and-control/new-expert-eyes-over-fukushima-open-source-responses-to-the-nuclear-crisis-in-japan/ Article on OSS responses to Fukushima]


* '''Physics'''
* '''Physics'''
** Recommended
** Projects
*** R (see Biochemistry)
*** [http://www.r-project.org/ R] - a programming language for statistical analysis
*** Octave (see Neuroscience)
*** [http://www.gnu.org/software/octave/ Octave]
*** [http://www.sagemath.org/ Sage Math]
*** Sage Math (see Physics)
** Other
** Testimonials
** Resources:
** Resources:
*** [http://en.wikipedia.org/wiki/Category:Free_physics_software Wikipedia Article]
*** [http://en.wikipedia.org/wiki/Category:Free_physics_software Wikipedia Article]


* '''Political science'''
* '''Political science'''
** Recommended
** Projects
*** [http://cat.ucsur.pitt.edu/ Coding Analysis Toolkit (CAT)] - a suite of tools for analysis of text datasets
**** Comments & Testimonials:
*** [http://commons.codeforamerica.org/apps | Civic Commons] - a website for sharing government tools
*** [http://commons.codeforamerica.org/apps | Civic Commons] - a website for sharing government tools
**** Comments & Testimonials:
** Other
***** Seems to be abandoned by its maintainers.
*** [http://cat.ucsur.pitt.edu/ Coding Analysis Toolkit (CAT)] - a suite of tools for analysis of text datasets
*** R (see Biochemistry)
*** [http://www.r-project.org/ R] - a programming language for statistical analysis
** Testimonials
** Resources
** Resources
*** A number of [http://commons.codeforamerica.org/apps | these government/civic projects] might be applicable, though there are some proprietary projects mized in. The site itself is an open source project.
*** A number of [http://commons.codeforamerica.org/apps | these government/civic projects] might be applicable, though there are some proprietary projects mixed in. The site itself is an open source project, though an abandoned one.


* '''Psychology'''
* '''Psychology'''
** Projects
** Recommended:
*** BioSig (see Biomedical Engineering)
*** [http://www.psychopy.org/ PsychoPy]
*** PsychoPy (see Neuroscience)
*** [http://www.r-project.org/ R] - a programming language for statistical analysis
*** R (see Biochemistry)
*** [http://www.gnu.org/software/octave/ Octave]
** Other
** Testimonials
** Resources:
** Resources:
*** [http://opensourcecognitivescience.wordpress.com/2009/07/29/tools-for-psychology-and-neuroscience/ List of tools]
*** [http://opensourcecognitivescience.wordpress.com/2009/07/29/tools-for-psychology-and-neuroscience/ List of tools]


* '''Statistics'''
* '''Statistics'''
** Recommended
** Projects
*** [http://www.r-project.org/ R] - a programming language for statistical analysis
*** [http://www.numpy.org/ NumPy]
*** [http://www.numpy.org/ NumPy]
**** Comments & Testimonials:
*** [http://www.scipy.org/ SciPy]
*** [http://www.scipy.org/ SciPy]
**** Comments & Testimonials:
** Other
*** R (see Biochemistry)
** Testimonials
** Resources:
** Resources:
*** [http://en.wikipedia.org/wiki/Category:Free_statistical_software Wikipedia article]
*** [http://en.wikipedia.org/wiki/Category:Free_statistical_software Wikipedia article]

= Less Common Departments =

* '''Aeronautics and astronautics'''
** Recommended
*** [http://www.sunpy.org/ SunPy], a solar physics library actively maintained by NASA GSFC.
** Other
*** [http://makerplane.org/ MakerPlane], a project for building personal planes ([http://opensource.com/life/13/1/open-source-aviation-makerplane article])
** Testimonials
** Resources:
*** Portland State (open source) Aerospace Society: http://psas.pdx.edu/
*** NASA Open Source list at [http://code.nasa.gov/project/ code.nasa.gov]

* '''Atmospheric sciences'''
** Recommended
*** [http://cmascenter.org/cmaq/ CMAQ] - EPA's development project: a suite of programs for conducting air quality model simulations
*** [http://www.unidata.ucar.edu/software/gempak/ GEMPAK] - soon to be replaced with [http://www.unidata.ucar.edu/software/awips2/ AWIPS II] - a weather forecasting, display and analysis package, lead developer: National Weather Service
** Other
*** [http://www.openmadrigal.org/ OpenMadrigal] - a database for accessing/archiving geospace data (does geospace == atmospheric science?)
** Testimonials
** Resources
*** [http://www.haystack.mit.edu/atm/open/index.html MIT's Haystack] has some open projects
*** [http://www.openradar.org/cgi-bin/openradar.cgi/Projects OpenRadar] has radio-related oss projects
*** [http://www.ucar.edu/tools/applications_desc.jsp UCAR list]

* '''Biomedical Engineering'''
** Recommended
*** [http://biosig.sourceforge.net/ BioSig] - an open source software library for biomedical signal processing of biosignals such as EEG, ECoG, ECG, EOG and EMG
*** [http://opensim.stanford.edu/work/index.html OpenSim] - tool for modeling and simulation of movement
** Other
** Testimonials
** Resources

* '''Linguistics'''
** Recommended
*** [http://nltk.org/ Python Natural Language Toolkit]
** Other
*** [https://github.com/joshua-decoder/joshua Joshua Machine Translation Toolkit]
*** [http://www.kura.ats.lmu.de/index.php Kura], a multi-user open source linguistic database
*** [http://www.apertium.org/ Apertium] open source machine translation
** Testimonials
** Resources:
*** [http://linguistlist.org/ LINGUIST] email discussion list and software index
*** [http://www-nlp.stanford.edu/links/statnlp.html List of open source statistical NLP tools]
*** [http://sourceforge.net/directory/science-engineering/linguistics/os:linux/freshness:recently-updated/ Sourceforge.net list of language-related software]

* '''Materials science'''
** Recommended
*** [http://espressomd.org/wordpress/about/summary/ ESPRESSO] - a software package for performing and analyzing simulations of “coarse-grained” models as used in soft-matter research

** Other
** Testimonials
** Resources
*** [http://www.tms.org/pubs/journals/jom/0805/powell-0805.html 2008 discussion of open source in materials science]

* '''Nuclear Engineering'''
** Recommended
** Other
** Testimonials
** Resources
*** [http://fukushimaforum.wordpress.com/workshops/sts-forum-on-the-2011-fukushima-east-japan-disaster/manuscripts/session-3-radiation-information-and-control/new-expert-eyes-over-fukushima-open-source-responses-to-the-nuclear-crisis-in-japan/ Article on OSS responses to Fukushima]

Latest revision as of 03:15, 26 February 2015

We'd like to improve our outreach to non-CS majors in the sciences by finding open source projects in their disciplines. We plan to use this information both in our publicity and when we're looking for projects to help students contribute to. To that extent, we're asking both for short testimonials (for publicity) as well as insight on how accessible these projects are to newcomers.


Instructions

Please add information and testimonials wherever you see fit. If a discipline is missing, please add it. You can add the same project to multiple disciplines.

Please format disciplines in the following way:

  • Name of Discipline
    • Projects
      • OSS project that is used within this discipline. Make sure to leave a URL to the project website and if possible a brief description of the software.
        • Comments & Testimonials:
          • This project is poorly documented.
          • This project has a really active, friendly maintainer.
          • "This is a testimonial about the project. It's great, I use it all the time in my research! I am totally okay with OpenHatch using my testimonial in outreach emails and similar materials." (Optional attribution - name, position, url of person leaving the testimonial.)
      • Another project
        • Comments & Testimonials:
          • Comment
          • Testimonial
      • A project previously mentioned in another discipline: please see 'name of other discipline'
    • Resources
      • Links to places to find more info about projects in this discipline.

Domains/Departments

  • Aeronautics and astronautics
    • Projects
      • SunPy, a solar physics library actively maintained by NASA GSFC.
        • Comments & Testimonials:
      • MakerPlane, a project for building personal planes (article)
        • Comments & Testimonials:
    • Resources:
  • Atmospheric sciences
  • Projects
      • CMAQ - EPA's development project: a suite of programs for conducting air quality model simulations
        • Comments & Testimonials:
      • GEMPAK - soon to be replaced with AWIPS II - a weather forecasting, display and analysis package, lead developer: National Weather Service
        • Comments & Testimonials:
      • OpenMadrigal - a database for accessing/archiving geospace data (does geospace == atmospheric science?)
        • Comments & Testimonials:
    • Resources
  • Biochemistry
    • Projects
      • BioPython - a set of tools for biological computation written in Python
        • Comments & Testimonials:
      • BioPerl
        • Comments & Testimonials:
      • OpenBabel - allows anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas
        • Comments & Testimonials:
      • ImageJ
        • Comments & Testimonials:
      • R - a programming language for statistical analysis
        • Comments & Testimonials:
    • Resources
  • Biology
    • Projects
      • BioPython (see Biochemistry)
      • BioPerl (see Biochemistry)
      • ImageJ (see Biochemistry)
      • R (see Biochemistry)
    • Resources
  • Biomedical Engineering
    • Projects
      • BioSig - an open source software library for biomedical signal processing of biosignals such as EEG, ECoG, ECG, EOG and EMG
        • Comments & Testimonials:
      • OpenSim - tool for modeling and simulation of movement
        • Comments & Testimonials:
    • Resources
  • Economics
    • Projects
      • R (see Biochemistry)
    • Resources:
  • Linguistics


  • Neuroscience
    • Projects
      • NeuroDebian - a turnkey Linux distribution with major open source neuroimaging packages included
        • Comments & Testimonials:
      • Neurosynth - an online platform to perform meta-analyses on neuroimaging studies
        • Comments & Testimonials:
      • AFNI - software for performing neuroimaging analyses maintained by the NIH
        • Comments & Testimonials:
      • SPM - software for doing statistical parametric mapping analysis
        • Comments & Testimonials:
      • ANTs - software to put individual fMRI scans in a common space that can be compared across subjects
        • Comments & Testimonials:
      • Nipype - a common Python interface to a variety of neuroimaging packages
        • Comments & Testimonials:
      • Nibabel - a Python package to load in neuroimaging data files
        • Comments & Testimonials:
      • C-PAC - a Python package to configure resting state fMRI analyses
        • Comments & Testimonials:
      • Octave - an open source version of Matlab; many Matlabpbased neuroimaging packages could work with Octave with some extra development
        • Comments & Testimonials:
      • Backyard Brains
        • Comments & Testimonials:
      • PsychoPy - a set of tools for doing stimulus presentation and capturing behavioral data
        • Comments & Testimonials:
          • Very friendly, active maintainers but difficult setup process, especially for Windows.
      • PyXNAT - allows Python to interface with a popular neuroimaging data management tool
        • Comments & Testimonials:
      • PyOpenWorm - Python interface to fetch C. elegans data.
        • Comments & Testimonials:
      • R (see Biochemistry)
      • BioSig (see Biomedical Engineering)
    • Resources:
  • Nuclear Engineering
    • Projects
      • LAMMPS - a molecular dynamics library that can be used to model parallel atomic/subatomic processes at large scale, lead by Sandia National Laboratories
        • Comments & Testimonials:
      • OpenGeiger - an open source, open hardware Geiger Counter
        • Comments & Testimonials:
    • Resources
  • Physics
    • Projects
      • R (see Biochemistry)
      • Octave (see Neuroscience)
      • Sage Math (see Physics)
    • Resources:
  • Political science
    • Projects
      • Coding Analysis Toolkit (CAT) - a suite of tools for analysis of text datasets
        • Comments & Testimonials:
      • | Civic Commons - a website for sharing government tools
        • Comments & Testimonials:
          • Seems to be abandoned by its maintainers.
      • R (see Biochemistry)
    • Resources
      • A number of | these government/civic projects might be applicable, though there are some proprietary projects mixed in. The site itself is an open source project, though an abandoned one.
  • Psychology
    • Projects
      • BioSig (see Biomedical Engineering)
      • PsychoPy (see Neuroscience)
      • R (see Biochemistry)
    • Resources:
Retrieved from "https://wiki.openhatch.org/wiki/Oss_projects_by_domain?oldid=12230"